Package: wrappedtools 0.9.10

wrappedtools: Useful Wrappers Around Commonly Used Functions

The main functionalities of 'wrappedtools' are: adding backticks to variable names; rounding to desired precision with special case for p-values; selecting columns based on pattern and/or class and storing their position, name, and backticked name; computing and formatting of descriptive statistics (e.g. mean±SD), comparing groups and creating publication-ready tables with descriptive statistics and p-values; creating specialized plots for correlation matrices. Functions were mainly written for my own daily work or teaching, but may be of use to others as well.

Authors:Andreas Busjahn [cre, aut], Franziska Eidloth [aut], Bilal Asser [aut]

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manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
wrappedtools/json (API)

# Install 'wrappedtools' in R:

install.packages('wrappedtools', repos = c('https://abusjahn.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/abusjahn/wrappedtools/issues

Datasets:

faketrial - Results from a simulated clinical trial with interaction effects.

On CRAN:

descriptive-statistics test-statistic

5.26 score 2 stars 15 scripts 694 downloads 49 exports 116 dependencies

Last updated from:181d57769d. Checks:9 OK. Indexed: yes.

Target	Result	Time
linux-devel-x86_64	OK	201
source / vignettes	OK	245
linux-release-x86_64	OK	214
macos-release-arm64	OK	197
macos-oldrel-arm64	OK	210
windows-devel	OK	162
windows-release	OK	150
windows-oldrel	OK	138
wasm-release	OK	138

Exports:bt cat_desc_stats cat_desc_table cn ColSeeker compare_n_numvars compare_n_qualvars compare2numvars compare2qualvars cortestR detect_outliers eGFR FindVars flex2rmd formatP ggcormat glmCI identical_cols ksnormal label_outliers logrange_1 logrange_123456789 logrange_12357 logrange_15 logrange_5 markSign mean_cl_boot meansd meanse median_cl_boot median_cl_boot_gg median_quart medianse pairwise_fisher_test pairwise_ordcat_test pairwise_t_test pairwise_wilcox_test pdf_kable plot_LB plot_MM print_kable roundR se_median SEM surprisal t_var_test tab.search var_coeff WINratio

Dependencies:askpass backports base64enc bit bit64 boot broom bslib cachem cellranger class cli clipr codetools coin cpp11 crayon curl data.table DescTools digest dplyr e1071 evaluate Exact expm farver fastmap flextable fontawesome fontBitstreamVera fontLiberation fontquiver forcats fs gdtools generics ggplot2 gld glue gtable haven highr hms htmltools httr isoband jquerylib jsonlite kableExtra knitr labeling lattice libcoin lifecycle lmom magrittr MASS Matrix matrixStats memoise mime modeltools multcomp mvtnorm nortest officer openssl pillar pkgconfig prettyunits progress proxy purrr R6 ragg rappdirs RColorBrewer Rcpp readr readxl rematch rlang rlist rmarkdown rootSolve rstudioapi S7 sandwich sass scales stringi stringr survival svglite sys systemfonts textshaping TH.data tibble tidyr tidyselect tinytex tzdb utf8 uuid vctrs viridisLite vroom withr xfun XML xml2 yaml zip zoo

Usage of 'wrappedtools'

'wrappedtools' | Installation | Examples

Rendered fromwrappedtools.Rmdusingknitr::rmarkdown

Last update: 2026-05-28
Started: 2021-04-28

Help page	Topics
Add backticks to names or remove them	bt
Compute absolute and relative frequencies.	cat_desc_stats
Compute absolute and relative frequencies for a table.	cat_desc_table
Shortcut for colnames()	cn
Find numeric index and names of columns based on class(es) and patterns	ColSeeker
Comparison for columns of Gaussian or ordinal measures for n groups	compare_n_numvars
Comparison for columns of factors for more than 2 groups with post-hoc	compare_n_qualvars
Comparison for columns of numbers for 2 groups	compare2numvars
Comparison for columns of factors for 2 groups	compare2qualvars
Correlations with significance	cortestR
Find outliers based on IQR	detect_outliers
Estimation of glomerular filtration rate (eGFR) based on sex, age, and either serum creatinine and/or cystatin C	eGFR
Results from a simulated clinical trial with interaction effects.	faketrial
Find numeric index and names of columns based on patterns	FindVars
Transform flextable to rmd if non-interactive	flex2rmd
Re-format p-values, avoiding rounding to 0 and adding surprisal if requested	formatP
Print graphical representation of a correlation matrix.	ggcormat
Confidence interval for generalized linear models	glmCI
Find and optionally remove identical columns in a data frame.	identical_cols
Kolmogorov-Smirnov-Test against Normal distribution	ksnormal
Add labels to outliers in boxplot/beeswarm.	label_outliers
Predefined sets of labels for plots with log-scaled axes	logrange_1 logrange_123456789 logrange_12357 logrange_15 logrange_5
Convert significance levels to symbols	markSign
Compute confidence interval of mean by bootstrapping.	mean_cl_boot
Compute mean and sd and put together with the ± symbol.	meansd
Compute mean and standard error of mean and put together with the ± symbol.	meanse
Compute confidence interval of median by bootstrapping.	median_cl_boot
Rename output from median_cl_boot for use in ggplot.	median_cl_boot_gg
Compute median and quartiles and put together.	median_quart
Compute standard error of median.	medianse
Pairwise Fisher's exact tests	pairwise_fisher_test
Pairwise comparison for ordinal categories	pairwise_ordcat_test
Extended pairwise t-test	pairwise_t_test
Pairwise Wilcoxon tests	pairwise_wilcox_test
Enhanced knitr::kable with latex	pdf_kable
Lineweaver-Burk diagram	plot_LB
Michaelis-Menten enzyme kinetics model and plot	plot_MM
Enhanced knitr::kable with definable number of rows and/or columns for splitting	print_kable
Automatic rounding to a reasonable length, based on largest number	roundR
Compute standard error of median	se_median
Standard Error of Mean.	SEM
Compute surprisal aka Shannon information from p-values	surprisal
Independent sample t-test with test for equal variance	t_var_test
Search within data.frame or tibble	tab.search
Compute coefficient of variance.	var_coeff
Comparison for groups in clinical trials based on all possible combinations of subjects	WINratio

Package: wrappedtools 0.9.10

wrappedtools: Useful Wrappers Around Commonly Used Functions

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